Eucalyptus pauciflora was first formally described in 1827 by Kurt Polycarp Joachim Sprengel from an unpublished description by Franz Sieber. Sprengel published the description in Systema Vegetabilium.[6][7] The specific epithet pauciflora is from the Latin pauciflorus meaning "few-flowered".[8][9] The term pauciflora (few-flowered) is a misnomer, and may originate in an early collected specimen losing its buds in transit.[10]